CKT - Causal Knowledge Trace
About
Graph Configuration
Data Upload
Graph Visualization
Causal Analysis
Knowledge Graph Configuration
Instructions:
Configure the parameters below to generate your knowledge graph. All fields marked with * are required.
Search Exposure CUIs *
Type at least 3 characters and press Enter to search. All matching results will be shown. Click on results to select CUIs.
Selected CUIs:
You can also manually enter CUI codes here (format: C followed by 7 digits).
C0020538, C4013784, C0221155, C0745114, C0745135
Clear Selection
Consolidated Exposure Name *
Single consolidated name representing all exposure concepts. Spaces will be automatically converted to underscores.
Publication Year Cutoff *
Only include citations published on or after this year.
1980
1981
1982
1983
1984
1985
1986
1987
1988
1989
1990
1991
1992
1993
1994
1995
1996
1997
1998
1999
2000
2001
2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
2015
2016
2017
2018
2019
2020
2021
2022
2023
2024
2025
2026
2027
Predication Types *
Select one or more predication types. CAUSES is selected by default. Hold Ctrl/Cmd to select multiple. Selected items will be highlighted.
CAUSES
AFFECTS
AUGMENTS
COMPLICATES
DISRUPTS
INHIBITS
PRECEDES
PREDISPOSES
PREVENTS
PRODUCES
STIMULATES
Search Outcome CUIs *
Type at least 3 characters and press Enter to search. All matching results will be shown. Click on results to select CUIs.
Selected CUIs:
You can also manually enter CUI codes here (format: C followed by 7 digits).
C2677888, C0750901, C0494463, C0002395
Clear Selection
Consolidated Outcome Name *
Single consolidated name representing all outcome concepts. Spaces will be automatically converted to underscores.
SemMedDB Version *
SemMedDB version by filtering method.
heuristic
LLM-based
heuristic+LLM-based
Search Blocklist CUIs
Type at least 3 characters and press Enter to search for concepts to exclude.
Selected CUIs:
You can also manually enter CUI codes here (format: C followed by 7 digits). These concepts will be filtered out during graph creation.
C0001687, C0002526, C0003043, C0003062, C0005515, C0009566, C0012634, C0013227, C0021521, C0021948, C0027361, C0027362, C0027363, C0028622, C0029224, C0029235, C0030705, C0039082, C0039796, C0087111, C0159028, C0178310, C0178341, C0178353, C0178355, C0178359, C0243192, C0422820, C0424450, C0436606, C0442826, C0476466, C0478681, C0478682, C0480773, C0481349, C0481370, C0557587, C0565657, C0580210, C0580211, C0589603, C0596048, C0596090, C0597010, C0597237, C0597240, C0677042, C0687732, C1257890, C1258127, C1318101, C1457887, C1609432, C0007634, C0020114, C0237401, C0011900, C1273869, C0449851, C0277785, C0184661, C1273870, C0185125, C0879626, C0004927, C0936012, C0311392, C0597198, C0018684, C0042567, C0029921, C0683971, C0016163, C0024660, C0687133, C0037080, C0680022, C1185740, C0871261, C0544461, C1260954, C0877248, C0242485, C0205147, C0486805, C0005839, C0021562, C0205148, C0031843, C0040223, C0205145, C0205400, C0086388, C0014406, C0520510, C0035168, C0029237, C0277784, C0001779, C0542559, C0035647, C0025664, C0700287, C0678587, C0205099, C0205146, C0237753, C0441800, C0449719, C0348026, C0008902, C0586173, C0332479, C0807955, C0559546, C0031845, C0678594, C0439792, C0557854, C1522240, C1527144, C0449234, C0542341, C0079809, C0205094, C0037455, C0025118, C0441471, C0441987, C0439534, C0392360, C0456603, C0699733, C0036397, C0725066, C0496675, C0282354, C0015127, C1273937, C1368999, C0442804, C0449286, C0205082, C0814472, C1551338, C0599883, C0450429, C1299582, C0336791, C0443177, C0025080, C1372798, C0028811, C0205246, C0449445, C0332185, C0332307, C0443228, C1516635, C0376636, C0221423, C0037778, C0199168, C0008949, C0014442, C0456387, C1265611, C0243113, C0549177, C0229962, C0600686, C1254351, C0243095, C1444647, C0033684, C0338067, C0441712, C0679607, C0808233, C1373236, C0243082, C1306673, C1524062, C0002085, C0243071, C0238767, C0005508, C0392747, C0008633, C0205195, C0205198, C0456205, C0521116, C0011155, C1527240, C1527148, C0743223, C0178602, C1446466, C0013879, C0015295, C1521761, C1522492, C0017337, C0017428, C0017431, C0079411, C0018591, C0019932, C0021149, C0233077, C0021920, C0022173, C1517945, C0680220, C0870883, C0567416, C0596988, C0243132, C0029016, C1550456, C0243123, C0030956, C0851347, C0031328, C0031327, C1514468, C0033268, C0449258, C0871161, C1521828, C0443286, C1547039, C1514873, C0035668, C0439793, C0205171, C0449438, C1547045, C0449913, C0042153, C0205419, C1441526, C1140999, C0679670, C0431085, C1185625, C1552130, C1553702, C1547020, C0242114, C0439165, C0679646, C0599755, C0681850
Clear Selection
Degree *
Number of degrees for graph traversal (1-3). Controls the depth of relationships included in the graph.
1
2
3
Squelch Thresholds (minimum unique PMIDs) *
Minimum number of unique PMIDs required for each degree level (1-1000). Fields are enabled based on selected degree.
Threshold for 1st Degree:
Threshold for 2nd Degree:
Threshold for 3rd Degree:
Create Graph
Ready to create graph
All inputs are valid. Click 'Create Graph' to proceed.
Creating Graph...
Please wait while your graph is being created. This process may take several minutes.
Initializing...
Status: Ready to start...